JBrowse
JBrowse
Use JBrowse to view the updated genome sequences of Fusarium graminearum strain PH-1 (YL1 version) and associated different versions of gene/transcript annotations including the newest YL1 full-length transcript annotation, the EnsemblFungi RR1 gene annotation (release 41 and abolished release 27), and the Broad Institute V3 gene annotation. You can also view the strand-specific RNA-seq (CPM normalized) coverages of different life stages or conditions generated by two methods: poly-A selection and rRNA depletion.
Please note: collapes file mean that isoforms differing only in the 5’ start of their first exon were collapsed to keep only the longest ones.
Typically, collapes file are used. Uncollapsed files are for review only